CNVkit
stable
  • Quick start
  • Who else is using CNVkit?
  • Copy number calling pipeline
  • Plots and graphics
  • Text and tabular reports
  • Compatibility and other I/O
  • RNA expression
  • Additional scripts
  • File formats
  • Allele frequencies and copy number
  • Bias corrections
  • Chromosomal sex
  • Calling copy number gains and losses
  • Tumor analysis
  • Tumor heterogeneity
  • Germline analysis
  • Whole-genome sequencing and targeted amplicon capture
  • cnvlib package
  • scikit-genome package
CNVkit
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© Copyright 2014-2016, Eric Talevich. Revision b218280e.

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